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2P
Multiphoton Microscopy
We design and build high-resolution microscopes to study the three-dimensional vascular and neuronal structures of the cortex at depths and resolutions pushing the limits of optical imaging.
Oxygen Imaging
We developed imaging systems for use with oxygen-sensitive phosphorescent dyes in order to map cortical oxygen tension (pO2) and study its impact on the progression of ischemic stroke.
Custom Ultrafast Lasers
We design and build custom ultrafast lasers to push the limits of traditional multiphoton microscopy and enable advanced multi-wavelength excitation strategies.
3D Single Particle Tracking
We built a three-dimensional single particle tracking system capable of spatial localization far beyond the diffraction limit for use in studying molecular transport dynamics.
A Deep Learning Approach for Improving Two-Photon Vascular Imaging Speeds
A potential method for tracking neurovascular disease progression over time in preclinical models is multiphoton fluorescence …
Annie Zhou
,
Samuel Mihelic
,
Shaun Engelmann
,
Alankrit Tomar
,
Andrew Dunn
,
Vagheesh Narasimhan
PDF
DOI
Diamond Raman laser and Yb fiber amplifier for in vivo multiphoton fluorescence microscopy
Here we introduce a fiber amplifier and a diamond Raman laser that output high powers (6.5 W, 1.3 W) at valuable wavelengths (1060 nm, …
Shaun Engelmann
,
Annie Zhou
,
Ahmed Hassan
,
Michael Williamson
,
Jeremy Jarrett
,
Evan Perillo
,
Alankrit Tomar
,
David Spence
,
Theresa Jones
,
Andrew Dunn
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DOI
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bioRxiv
Evaluation of resonant scanning as a high-speed imaging technique for two-photon imaging of cortical vasculature
We demonstrate a simple, low-cost two-photon microscope design with both galvo-galvo and resonant-galvo scanning capabilities. We …
Annie Zhou
,
Shaun Engelmann
,
Samuel Mihelic
,
Alankrit Tomar
,
Ahmed Hassan
,
Andrew Dunn
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DOI
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bioRxiv
Segmentation-Less, Automated, Vascular Vectorization
Recent advances in two-photon fluorescence microscopy (2PM) have allowed large scale imaging and analysis of blood vessel networks in …
Samuel Mihelic
,
William Sikora
,
Ahmed Hassan
,
Michael Williamson
,
Theresa Jones
,
Andrew Dunn
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bioRxiv
Mathematical synthesis of the cortical circulation for the whole mouse brain—part II: Microcirculatory closure
Recent advancements in multiphoton imaging and vascular reconstruction algorithms have increased the amount of data on cerebrovascular …
Grant Hartung
,
Shoale Badr
,
Samuel Mihelic
,
Andrew Dunn
,
Xiaojun Cheng
,
Sreekanth Kura
,
David Boas
,
David Kleinfeld
,
Ali Alaraj
,
Andreas Linninger
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Reactive astrocytes facilitate vascular repair and remodeling after stroke
Brain injury causes astrocytes to assume a reactive state that is essential for early tissue protection, but how reactive astrocytes …
Michael Williamson
,
Cathleen Joy Fuertes
,
Andrew Dunn
,
Michael Drew
,
Theresa Jones
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