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Segmentation-Less, Automated, Vascular Vectorization
Recent advances in two-photon fluorescence microscopy (2PM) have allowed large scale imaging and analysis of blood vessel networks in …
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Segmentation of 3D trajectories acquired by TSUNAMI microscope: An application to EGFR trafficking
Whereas important discoveries made by single-particle tracking have changed our view of the plasma membrane organization and motor …
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Improving z-tracking accuracy in the two-photon single-particle tracking microscope
Here, we present a method that can improve the z-tracking accuracy of the recently invented TSUNAMI (Tracking of Single particles Using …
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Rapid computation of the amplitude and phase of tightly focused optical fields distorted by scattering particles
We develop an efficient method for accurately calculating the electric field of tightly focused laser beams in the presence of specific …
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Efficient Processing of Laser Speckle Contrast Images
Though laser speckle contrast imaging enables the measurement of scattering particle dynamics with high temporal resolution, the …
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Fluorescence-lifetime-based tomography for turbid media
We derive a novel algorithm to recover the in vivo distributions of fluorophores based on an asymptotic lifetime analysis of …
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Computational microscopy in embryo imaging
The growth of computing power has greatly improved our ability to extract quantitative information about complicated three-dimensional …
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Three dimensional Monte Carlo code for photon migration through complex heterogeneous media including the adult human head
We describe a novel Monte Carlo code for photon migration through 3D media with spatially varying optical properties. The code is …
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Transport-based image reconstruction in turbid media with small source–detector separations
We demonstrate a new method for imaging through several millimeters of a turbid sample with a resolution of approximately 100 µm by …
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